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1

Comparison of Targeted Next-Generation Sequencing (NGS) and Real-Time PCR in the Detection of EGFR , KRAS, and BRAF Mutations on Formalin-Fixed, Paraffin-Embedded Tumor Material of Non-Small Cell Lung Carcinoma-Superiority of NGS

Tuononen, Katja, Mäki-Nevala, Satu, Sarhadi, Virinder Kaur, Wirtanen, Aino, Rönty, Mikko, Salmenkivi, Kaisa, Andrews, Jenny M., Telaranta-Keerie, Aino I., Hannula, Sari, Lagström, Sonja, Ellonen, Pekk

Journal:

Genes, Chromosomes and Cancer

Year:

2013

Language:

english

File:

PDF, 329 KB

english, 2013

2

An Empirical Study of the Drivers of Consumer Acceptance of Mobile Advertising

Merisavo, Marko, Kajalo, Sami, Karjaluoto, Heikki, Virtanen, Ville, Salmenkivi, Sami, Raulas, Mika, Leppäniemi, Matti

Journal:

Journal of Interactive Advertising

Year:

2007

Language:

english

File:

PDF, 646 KB

english, 2007

3

CDK4 is a probable target gene in a novel amplicon at 12q13.3–q14.1 in lung cancer

Harriet Wikman, Penny Nymark, Aki Väyrynen, Sonata Jarmalaite, Anne Kallioniemi, Kaisa Salmenkivi, Katri Vainio-Siukola, Kirsti Husgafvel-Pursiainen, Sakari Knuutila, Maija Wolf, Sisko Anttila

Journal:

Genes, Chromosomes and Cancer

Year:

2005

Language:

english

File:

PDF, 317 KB

english, 2005

4

Cutaneous T-cell lymphoma-associated lung cancers show chromosomal aberrations differing from primary lung cancer

Sonja Hahtola, Elke Burghart, Marjut Puputti, Leena Karenko, Wael M. Abdel-Rahman, Liisa Väkevä, Leila Jeskanen, Susanna Virolainen, Jaakko Karvonen, Kaisa Salmenkivi, Vuokko Kinnula, Heikki Joensuu,

Journal:

Genes, Chromosomes and Cancer

Year:

2008

Language:

english

File:

PDF, 635 KB

english, 2008

5

CDKN2A, NF2, and JUN are dysregulated among other genes by miRNAs in malignant mesothelioma—A miRNA microarray analysis

Mohamed Guled, Leo Lahti, Pamela M. Lindholm, Kaisa Salmenkivi, Izhar Bagwan, Andrew G. Nicholson, Sakari Knuutila

Journal:

Genes, Chromosomes and Cancer

Year:

2009

Language:

english

File:

PDF, 152 KB

english, 2009

6

Integrative analysis of microRNA, mRNA and aCGH data reveals asbestos- and histology-related changes in lung cancer

Penny Nymark, Mohamed Guled, Ioana Borze, Ali Faisal, Leo Lahti, Kaisa Salmenkivi, Eeva Kettunen, Sisko Anttila, Sakari Knuutila

Journal:

Genes, Chromosomes and Cancer

Year:

2011

Language:

english

File:

PDF, 620 KB

english, 2011

7

Cysteine-rich protein 1 is regulated by transforming growth factor-β1 and expressed in lung fibrosis

Päivi M. Järvinen, Marjukka Myllärniemi, Hester Liu, Henna M. Moore, Outi Leppäranta, Kaisa Salmenkivi, Katri Koli, Leena Latonen, Arja M. Band, Marikki Laiho

Journal:

Journal of Cellular Physiology

Year:

2012

Language:

english

File:

PDF, 659 KB

english, 2012

8

Tumour-positive sentinel node findings in patients with ductal carcinoma in situ

M. Leidenius, K. Salmenkivi, K. von Smitten, P. Heikkilä

Journal:

Journal of Surgical Oncology

Year:

2006

Language:

english

File:

PDF, 94 KB

english, 2006

9

The prevalence of and risk factors for four or more metastatic axillary lymph nodes in breast cancer patients undergoing sentinel node biopsy

M. Leidenius, L. Vaalavirta, P. Heikkilä, K. von Smitten, K. Salmenkivi

Journal:

Journal of Surgical Oncology

Year:

2008

Language:

english

File:

PDF, 86 KB

english, 2008

10

VEGF in 105 pheochromocytomas: enhanced expression correlates with malignant outcome

KAISA SALMENKIVI, PÄIVI HEIKKIL, JIANQI LIU, CAJ HAGLUND, JOHANNA AROLA

Journal:

Year:

2003

Language:

english

File:

PDF, 162 KB

english, 2003

11

Lack of histologically suspicious features, proliferative activity, and p53 expression suggests benign diagnosis in phaeochromocytomas

K Salmenkivi, P Heikkilä, C Haglund, J Louhimo, J Arola

Journal:

Year:

2003

Language:

english

File:

PDF, 254 KB

english, 2003

12

Hemoglobin α and β are ubiquitous in the human lung, decline in idiopathic pulmonary fibrosis but not in COPD

Nobuhisa Ishikawa, Steffen Ohlmeier, Kaisa Salmenkivi, Marjukka Myllärniemi, Irfan Rahman, Witold Mazur, Vuokko L Kinnula

Journal:

Respiratory Research

Year:

2010

Language:

english

File:

PDF, 2.36 MB

english, 2010

13

Caveolins as tumour markers in lung cancer detected by combined use of cDNA and tissue microarrays

Harriet Wikman, Jouni K Seppänen, Virinder K Sarhadi, Eeva Kettunen, Kaisa Salmenkivi, Eeva Kuosma, Katri Vainio-Siukola, Balint Nagy, Antti Karjalainen, Thanos Sioris, Jarmo Salo, Jaakko Hollmén, Sak

Journal:

The Journal of Pathology

Year:

2004

Language:

english

File:

PDF, 473 KB

english, 2004

14

Increased expression of high mobility group A proteins in lung cancer

VK Sarhadi, H Wikman, K Salmenkivi, E Kuosma, T Sioris, J Salo, A Karjalainen, S Knuutila, S Anttila

Journal:

The Journal of Pathology

Year:

2006

Language:

english

File:

PDF, 331 KB

english, 2006

15

Gremlin localization and expression levels partially differentiate idiopathic interstitial pneumonia severity and subtype

M Myllärniemi, K Vuorinen, V Pulkkinen, H Kankaanranta, T Aine, K Salmenkivi, J Keski-Oja, K Koli, VL Kinnula

Journal:

The Journal of Pathology

Year:

2008

Language:

english

File:

PDF, 450 KB

english, 2008

16

Role of RNA binding protein HuR in ductal carcinoma in situ of the breast

Mira Heinonen, Annabrita Hemmes, Kaisa Salmenkivi, Kotb Abdelmohsen, Suvi-Tuuli Vilén, Marko Laakso, Marjut Leidenius, Tuula Salo, Sampsa Hautaniemi, Myriam Gorospe, Päivi Heikkilä, Caj Haglund, Ari R

Journal:

The Journal of Pathology

Year:

2011

Language:

english

File:

PDF, 425 KB

english, 2011

17

Proteomic studies on receptor for advanced glycation end product variants in idiopathic pulmonary fibrosis and chronic obstructive pulmonary disease

Steffen Ohlmeier, Witold Mazur, Kaisa Salmenkivi, Marjukka Myllärniemi, Ulrich Bergmann, Vuokko L. Kinnula

Journal:

PROTEOMICS - Clinical Applications

Year:

2010

Language:

english

File:

PDF, 294 KB

english, 2010

18

49. 201 mit Trasylol behandelte Pankreatitiden

K. Asp, K. Salmenkivi

Journal:

Langenbeck's Archives of Surgery

Year:

1969

Language:

german

File:

PDF, 110 KB

german, 1969

19

Rupture of splanchnic artery aneurysms

Jarmo A. Salo, Kari Salmenkivi, Anssi Tenhunen, Eero O. Kivilaakso

Journal:

World Journal of Surgery

Year:

1986

Language:

english

File:

PDF, 405 KB

english, 1986

20

76. Erfahrungen über die experimentelle orthotope Lebertransplantation beim Schwein und Hund

K. Salmenkivi, M. Lempinen, A. Sivula

Journal:

Langenbeck's Archives of Surgery

Year:

1971

Language:

english

File:

PDF, 142 KB

english, 1971

21

11. Die orthotope Lebertransplantation beim Hund

M. Lempinen, K. Salmenkivi, A. Sivula

Journal:

Langenbeck's Archives of Surgery

Year:

1971

Language:

german

File:

PDF, 61 KB

german, 1971

22

61. Hämodynamische Spätergebnisse nach Ligatur der Vena cava inferior

V. Perhoniemi, J. Salo, K. Salmenkivi

Journal:

Langenbeck's Archives of Surgery

Year:

1985

Language:

english

File:

PDF, 41 KB

english, 1985

23

Die chirurgische Behandlung der Pankreascysten

K. Salmenkivi, K. Asp

Journal:

Langenbeck's Archives of Surgery

Year:

1968

Language:

german

File:

PDF, 155 KB

german, 1968

24

9. Die transduodenale Sphincterotomie

M. Turunen, K. Salmenkivi

Journal:

Langenbeck's Archives of Surgery

Year:

1967

Language:

german

File:

PDF, 67 KB

german, 1967

25

Using Markov chain Monte Carlo and dynamic programming for event sequence data

Marko Salmenkivi, Heikki Mannila

Journal:

Knowledge and Information Systems

Year:

2005

Language:

english

File:

PDF, 1.73 MB

english, 2005

26

Diagnosing isolated cardiac sarcoidosis

R. Kandolin, J. Lehtonen, M. Graner, J. Schildt, K. Salmenkivi, S. M. Kivistö, M. Kupari

Journal:

Journal of Internal Medicine

Year:

2011

Language:

english

File:

PDF, 340 KB

english, 2011

27

Malignancy in pheochromocytomas : Review article

KAISA SALMENKIVI, PÄIVI HEIKKILÄ, CAJ HAGLUND, JOHANNA AROLA

Journal:

Year:

2004

Language:

english

File:

PDF, 1.38 MB

english, 2004

28

Elevated matrilysin levels in bronchoalveolar lavage fluid do not distinguish idiopathic pulmonary fibrosis from other interstitial lung diseases

KIRSI VUORINEN, MARJUKKA MYLLÄRNIEMI, LAURI LAMMI, PÄIVI PIIRILÄ, PAULA RYTILÄ, KAISA SALMENKIVI, VUOKKO L. KINNULA

Journal:

Year:

2007

Language:

english

File:

PDF, 201 KB

english, 2007

29

Cell-specific elevation of NRF2 and sulfiredoxin-1 as markers of oxidative stress in the lungs of idiopathic pulmonary fibrosis and non-specific interstitial pneumonia

WITOLD MAZUR, PAMELA LINDHOLM, KIRSI VUORINEN, MARJUKKA MYLLÄRNIEMI, KAISA SALMENKIVI, VUOKKO L. KINNULA

Journal:

Year:

2010

Language:

english

File:

PDF, 428 KB

english, 2010

30

DNA copy number loss and allelic imbalance at 2p16 in lung cancer associated with asbestos exposure

Kettunen, E, Aavikko, M, Nymark, P, Ruosaari, S, Wikman, H, Vanhala, E, Salmenkivi, K, Pirinen, R, Karjalainen, A, Kuosma, E

Journal:

British Journal of Cancer

Year:

2009

Language:

english

File:

PDF, 253 KB

english, 2009

31

Simple Semantics in Topic Detection and Tracking

Juha Makkonen, Helena Ahonen-Myka, Marko Salmenkivi

Journal:

Information Retrieval

Year:

2004

Language:

english

File:

PDF, 131 KB

english, 2004

32

Regulation of TGF-β storage and activation in the human idiopathic pulmonary fibrosis lung

Outi Leppäranta, Carla Sens, Kaisa Salmenkivi, Vuokko L. Kinnula, Jorma Keski-Oja, Marjukka Myllärniemi, Katri Koli

Journal:

Cell and Tissue Research

Year:

2012

Language:

english

File:

PDF, 776 KB

english, 2012

33

THE DIAGNOSIS OF HEPATOBILIARY DISEASES BY SERUM ENZYME ANALYSES

Aarne Konttinen, Veikko Hupli, Kari Salmenkivi

Journal:

Journal of Internal Medicine

Year:

1971

Language:

english

File:

PDF, 465 KB

english, 1971

34

Peripheral atherosclerosis in familial hypercholesterolaemia

V. PERHONIEMI, H. GYLLING, K. SALMENKIVI

Journal:

Journal of Internal Medicine

Year:

1989

Language:

english

File:

PDF, 400 KB

english, 1989

35

Expression of snail, twist, and Zeb1 in malignant mesothelioma

Heta Merikallio, Paavo Paakko, Kaisa Salmenkivi, Vuokko Kinnula, Teihu Harju, Ylermi Soini

Journal:

Year:

2012

Language:

english

File:

PDF, 571 KB

english, 2012

36

Variability in the precursor proteins of collagen I and III in different stages of COPD

Terttu Harju, Vuokko L Kinnula, Paavo Pääkkö, Kaisa Salmenkivi, Juha Risteli, Riitta Kaarteenaho

Journal:

Respiratory Research

Year:

2010

Language:

english

File:

PDF, 1.38 MB

english, 2010

37

Outcome of Patients with Ductal Carcinoma In Situ and Sentinel Node Biopsy

Meretoja, T. J., Heikkilä, P. S., Salmenkivi, K., Leidenius, M. H. K.

Journal:

Annals of Surgical Oncology

Year:

2012

Language:

english

File:

PDF, 186 KB

english, 2012

38

Frequent loss of heterozygosity at 6q in pheochromocytoma

Sebsebe Lemeta, Kaisa Salmenkivi, Lea Pylkkänen, Markku Sainio, Sirkku T. Saarikoski, Johanna Arola, Päivi Heikkilä, Caj Haglund, Kirsti Husgafvel-Pursiainen, Tom Böhling

Journal:

Human Pathology

Year:

2006

Language:

english

File:

PDF, 273 KB

english, 2006

39

Latent TGF-β binding proteins (LTBPs) 1 and 3 differentially regulate transforming growth factor-β activity in malignant mesothelioma

Piia Vehviläinen, Katri Koli, Marjukka Myllärniemi, Pamela Lindholm, Ylermi Soini, Kaisa Salmenkivi, Vuokko L. Kinnula, Jorma Keski-Oja

Journal:

Human Pathology

Year:

2011

Language:

english

File:

PDF, 880 KB

english, 2011

40

The preattentive processing of major vs. minor chords in the human brain: An event-related potential study

Paula Virtala, Venla Berg, Maari Kivioja, Juha Purhonen, Marko Salmenkivi, Petri Paavilainen, Mari Tervaniemi

Journal:

Neuroscience Letters

Year:

2011

Language:

english

File:

PDF, 289 KB

english, 2011

41

Control of Early Aspergillus Mortality After Lung Transplantation: Outcome and Risk Factors

M. Eriksson, K. Lemström, R. Suojaranta-Ylinen, T. Martelius, A. Harjula, J. Sipponen, M. Halme, A. Piilonen, K. Salmenkivi, V.J. Anttila, P. Hämmäinen

Journal:

Transplantation Proceedings

Year:

2010

Language:

english

File:

PDF, 340 KB

english, 2010

42

295 POSTER The role of sentinel node biopsy in patients with DCIS in core needle biopsy

J. Leikola, P. Heikkilä, M. Pamilo, K. Salmenkivi, K. von Smitten, M. Leidenius

Journal:

European Journal of Surgical Oncology (EJSO)

Year:

2006

Language:

english

File:

PDF, 62 KB

english, 2006

43

ELMOD2 Is a Candidate Gene for Familial Idiopathic Pulmonary Fibrosis

Ulla Hodgson, Ville Pulkkinen, Morag Dixon, Myriam Peyrard-Janvid, Marko Rehn, Päivi Lahermo, Vesa Ollikainen, Kaisa Salmenkivi, Vuokko Kinnula, Juha Kere, Pentti Tukiainen, Tarja Laitinen

Journal:

The American Journal of Human Genetics

Year:

2006

Language:

english

File:

PDF, 752 KB

english, 2006

44

Bone Morphogenetic Protein-4 Inhibitor Gremlin Is Overexpressed in Idiopathic Pulmonary Fibrosis

Katri Koli, Marjukka Myllärniemi, Kirsi Vuorinen, Kaisa Salmenkivi, Merja J. Ryynänen, Vuokko L. Kinnula, Jorma Keski-Oja

Journal:

The American Journal of Pathology

Year:

2006

Language:

english

File:

PDF, 1.39 MB

english, 2006

45

Genome segmentation using piecewise constant intensity models and reversible jump MCMC

Salmenkivi, M., Kere, J., Mannila, H.

Journal:

Year:

2002

Language:

english

File:

PDF, 225 KB

english, 2002

46

PD-024 Expression of High Mobility Group A proteins in lung cancer correlates with survival

Sarhadi, V., Wikman, H., Salmenkivi, K., Kuosma, E., Sioris, T., Salo, J., Karjalainen, A., Knuutila, S., Anttila, S.

Journal:

Year:

2005

Language:

english

File:

PDF, 329 KB

english, 2005

47

P-253 Copy number changes on CEP6, 5p15, 8q24 and 7p12 in sputum samples of asbestos exposed individuals

Kettunen, E., Salmenkivi, K., Vuopala, K., Toljamo, T., Knuutila, S., Kaleva, S., Huuskonen, M., Anttila, S.

Journal:

Year:

2005

Language:

english

File:

PDF, 149 KB

english, 2005

48

60 Asbestos-associatedmalignancies in the lung and pleura show distinct genetic aberrations

Lindholm, P., Nymark, P., Wikman, H., Salmenkivi, K., Nicholson, A., Korpela, M.V., Kaski, S., Ruosaari, S., Hollmén, J., Vanhala, E., Karjalainen, A., Anttila, S., Kinnula, V., Knuutila, S.

Journal:

Year:

2006

Language:

english

File:

PDF, 47 KB

english, 2006

49

102 DNA copy number profiling in malignant pleural mesothelioma by array CGH

Lindholm, P., Kinnula, V., Nicholson, A., Salmenkivi, K., Knuutila, S.

Journal:

Year:

2006

Language:

english

File:

PDF, 43 KB

english, 2006

50

Copy number gains on 5p15, 6p11-q11, 7p12, and 8q24 are rare in sputum cells of individuals at high risk of lung cancer

Kettunen, Eeva, Salmenkivi, Kaisa, Vuopala, Katri, Toljamo, Tuula, Kuosma, Eeva, Norppa, Hannu, Knuutila, Sakari, Kaleva, Simo, Huuskonen, Matti S., Anttila, Sisko

Journal:

Year:

2006

Language:

english

File:

PDF, 134 KB

english, 2006

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